MALDIquantForeign: Import/Export routines for MALDIquant2 years ago
Introduction | Setup | Import | Export | Analyse Mass Spectrometry Data | Session Information
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MALDIquant: Quantitative Analysis of Mass Spectrometry Data2 years ago
Introduction | Setup | MALDIquant objects | Workflow | Summary | Session Information
In-silico cleavage of polypeptides using the cleaver package4 years ago
Introduction | Simple Usage | Insulin & Somatostatin Example | Isotopic Distribution Of Tryptic Digested Insulin | Session Information | References
Z(log) Transformation for Laboratory Measurements5 years ago
Introduction | Z or Z(log) Transformation | Inverse Z or Z(log) Transformation/Undo Transformation | Z(log) Dependent Colour Gradient | Estimate Reference Limits | Working with Reference Tables | Missing Reference Limits | Impute Missing Laboratory Measurements | PBC Example | Session information | References
Fragmentation Analysis with topdownr7 years ago
Foreword | Questions and bugs | Introduction/Working with topdownr | Importing Files | The TopDownSet Anatomy | Technical Details | Fragment data | Condition data | Assay data | Subsetting a TopDownSet | Plotting a TopDownSet | Fragmentation Data Analysis of Myoglobin | Filter Conditions on Injection Times | Filter Fragments on CV | Filter Fragments on Intensity | Data Aggregation | Random Forest | Combining Fragmentation Conditions to Maximize Coverage | Building a Fragmentation Map | Session Information | References
Data Generation for topdownr8 years ago
Foreword | Questions and bugs | Introduction | The topdownr Data Generation Workflow | Installation of Additional Software | Setup the Thermo Software | Setup XMLMethodChanger | Setup Operating System | Setup ScanHeadsman | Creating Methods | Data preparation with topdownr | Data Acquisition | Data Preparation | Extracting Header Information | Convert .raw files into mzML | Session Info | References
